Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888624.1_cds_XP_016443226.1_38403
CDS Infomation

[gene=LOC107768621] [db_xref=GeneID:107768621] [protein=pentatricopeptide repeat-containing protein At2g15690-like] [protein_id=XP_016443226.1] [location=10492..11910] [gbkey=CDS]
Sequence

ATGGCGTCTCTCCACTCATTTCCCGGAACGGCTAACTACATCTTCTCCCCTAACACTCTC
CTAAAATTCCGTCTTCCGCCTTCTACACTCCATTACCAACCCCTCTGCGCTGCGCCACAC
GAACCCAGCACCACCGCTTCCCCACCACAGCACTCTGGCCGTAACACCAGCCACTACACT
CCACAGTCAAGACCTCGCCGGAATAACAAGCAAGATTACAGAAAAACCATTAGTATCATT
CAAAAAGAAGCTAAACCCTTAACACTGAGCCCCATCTCAGCAGATGATGTTAACTTGATG
ACTCTGTGCAATGAAGGTAAGTTTGAAGAAGTAATCGAGCACATTACGCAAGGCGTTGGC
GCTGACTTTCGTGTTTTTGAGGCATTGTTGAGCTACTGTACTAAGCTTGCGTTTTTGGAC
ATTGGGGAGAAGGTGCACGAGCTCTTATTACGCTCGCCGTGGAGTAACAATGTTGAATTG
AATGGTACGTTGGTGGAAATGTACGTTAAGAACGGGAGCATGAGGAACGCGAAAAAAGTG
TTTGATAAAATGCGTGAAAGGAAGTTGGAGTTATGGCACTTGATGATTAGTGGGTATGCA
GAAAGTGGAGATGGGGAAAGTGGTTTGCTTTTGTTTGAGCAGATGAGAAAACTTAGGGTG
TCGGAGCTCAATGGGGACACTTTTTCTGTGGTTCTTTCGGCTTGTGCTAGTAAGGGGGCT
GTCAAACAAGGTTTTATGTATTTTAAGCTGATGAAGAATGAGTATGGCATTGTTCCCGGA
ATTGAGCACTATTTAGGGATTATTGATGTTTTGGGCAAATCTGGGCATTTGAATGAAGCT
CTAGAGTTTGTTGAAGACATGCCTATTGAGCCTACAAAAGAAGTATGGCAGTCCATAATA
AATTTTGCACGAATTCATGGGGATATCGAACTTGAAGATCGAGCTGAGGAGCTGCTCATT
AGGTTCGATTCTTCTAGAAATATGGTTGATAAGCCCCCTGCACCATTTCAGAAGAGGCAT
TCTCAGTTTAATATGCTTGAGGGTAAGAATAGAGTTAACGAGTTCAAGAGCACAATTCAA
CACAGGGCAGATGTATATCAGAAATTGAAAGGCTTGAGCGGGCAAATGAGGGATGCAGGT
TATGTACCAGACACAAGGTATGTGCTTCATGATATTGATGAGGCGGCTAAGGAGCAAGCG
CTGATGTATCATAGTGAGAGATTGGCTATTGCATATGGTTTAATTAGTACTCCGGCAAGA
ACAACTCTTAGGATCATCAAAAACCTACGGATATGTGGTGACTGTCACAATGCAATTAAG
ATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTCAGAGATAACAAGCGGTTTCATCAT
TTCAGAGATGGTAAATGCTCCTGCAATGACTATTGGTGA

Peptide Sequence

PEP ID

XP_016443226.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Nicotiana tabacum]
Sequence

MASLHSFPGTANYIFSPNTLLKFRLPPSTLHYQPLCAAPHEPSTTASPPQHSGRNTSHYT
PQSRPRRNNKQDYRKTISIIQKEAKPLTLSPISADDVNLMTLCNEGKFEEVIEHITQGVG
ADFRVFEALLSYCTKLAFLDIGEKVHELLLRSPWSNNVELNGTLVEMYVKNGSMRNAKKV
FDKMRERKLELWHLMISGYAESGDGESGLLLFEQMRKLRVSELNGDTFSVVLSACASKGA
VKQGFMYFKLMKNEYGIVPGIEHYLGIIDVLGKSGHLNEALEFVEDMPIEPTKEVWQSII
NFARIHGDIELEDRAEELLIRFDSSRNMVDKPPAPFQKRHSQFNMLEGKNRVNEFKSTIQ
HRADVYQKLKGLSGQMRDAGYVPDTRYVLHDIDEAAKEQALMYHSERLAIAYGLISTPAR
TTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCNDYW

Transcript Sequence

Gene sequence data has not been registered.